PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KHN27706.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja
Family bHLH
Protein Properties Length: 309aa    MW: 34626.9 Da    PI: 4.9503
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KHN27706.1genomeTCUHKView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.75.7e-10126168855
                 HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  ErrRR r+++++  Lr+l+P+      +K++Ka+i   A  Y+++Lq
  KHN27706.1 126 SERRRRGRMKEKLYALRSLVPNI-----TKMDKASIIGDAASYVHDLQ 168
                 7*********************7.....7*****************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.418118167IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.0E-13124173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.49E-15124187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.46E-11125169No hitNo description
Gene3DG3DSA:4.10.280.103.5E-15125183IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-7126168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 309 aa     Download sequence    Send to blast
MNDFELYDFV ADPNFDQFIN LFRGENEDAN CDHFGSDLIN DCFANNQQQL LSCPANPFDQ  60
NNNNNAVNVY DPSSTFSSFS YYDRELKGEG GEELDEEHSS GTMTTTTNNA VGKPKVKTDM  120
SKTLISERRR RGRMKEKLYA LRSLVPNITK MDKASIIGDA ASYVHDLQAR ARKLKAEVAG  180
LEASLLVSEN YQGSINYPKN VQVARNISHP ICKKIMQMEM FQVEERGYYA KIMCNKVQGL  240
AASLYRALES LAGFNVQNSN LATVDDSFLL TFTLNVKGTE PEINLPNLKL WVTAALLNQG  300
FEFVASFPA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003540203.10.0PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR-like
SwissprotQ0V7X41e-97FIT_ARATH; Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR
TrEMBLA0A0B2R1760.0A0A0B2R176_GLYSO; Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR
STRINGGLYMA12G30240.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF36793358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.12e-94FER-like regulator of iron uptake
Publications ? help Back to Top
  1. Qi X, et al.
    Identification of a novel salt tolerance gene in wild soybean by whole-genome sequencing.
    Nat Commun, 2014. 5: p. 4340
    [PMID:25004933]